Transition Zone
Info Page Total Peptides Axo Count M+M Count KCl Count Terg Count TM Helices, Lipid Mod 30 Min DeFlag (Fold Δ) XAP5 (Fold Δ) Human Homolog Gene and Aliases ChlamyFPv5 Annotation References: Annotation v5.6 Description
Cre14.g614850.t1.1 74 2 27 42 3 0 7.98 ANK2 FAP33; ANK17 FAP33, Flagellar Associated Protein 33 Transition Zone Protein (2 spectral counts [Diener et al. Rosenbaum 2015]) FAP33  |  Protein of unknown function with ankyrin repeats, flagella associated; found in the flagellar proteome as FAP33. Phosphorylation characterized by Boesger et al. (29) [PMID: 19429781]
Cre09.g392867.t1.1 48 7 25 6 10 1; Ger; Far 7.44 none FMG2; FMG-1B FMG-1B, Flagella Membrane Glycoprotein 1B (Bloodgood 2009, Chlamydomonas Sourcebook Chapter 11). Identified in screen of redox-sensitive flagellar proteins (Wakabayashi and King 2006). Released by ciliary surface motility (Kamiya et al. Kato-Minoura 2018); Transition Zone Protein (51 spectral counts [Diener et al. Rosenbaum 2015]) FMG2  |  Flagella membrane protein, major form; highly expressed in Chlamydomonas during vegetative growth (and likely even in gametes)
Cre03.g190950.t1.2 32 15 4 10 3 0 8.53 -1.67 TUBA1C TUA1 TUA1, alpha-1 Tubulin (Silflow et al. Ranum 1985); Transition Zone Protein (41 spectral counts [Diener et al. Rosenbaum 2015]) TUA1  |  NULL
Cre04.g216850.t1.2 32 15 4 10 3 0 7.77 -2.07 TUBA1C TUA2 TUA2, alpha-2 Tubulin (Silflow et al. Ranum 1985); Transition Zone Protein (41 spectral counts [Diener et al. Rosenbaum 2015]) TUA2  |  GI:27358004; PMID: 3855249, PMID: 3460413, PMID: 14676280
Cre06.g263450.t1.2 30 0 18 10 2 0 -1.71 multiple EEF1A3 Elongation Factor 1 alpha Ciliary level increases during disassembly (Wang et al. Pan 2017); Transition Zone Protein (19 spectral counts [Diener et al. Rosenbaum 2015]) EEF1A3  |  EEF1a; high similarity to EF1A2; found in the flagellar proteome [PMID: 1599882]
Cre12.g498600.t1.2 30 0 18 10 2 0 multiple EEF1A1 Elongation Factor 1 alpha Transition Zone Protein (19 spectral counts [Diener et al. Rosenbaum 2015]) EEF1A1  |  Flagellar Associated Protein, found in the flagellar proteome [PMID: 15998802]
Cre16.g650600.t1.2 29 7 5 10 7 1 3.19 -1.62 none MST1 MST1, Mastigoneme (Song and Dentler Genbank)(Bloodgood 2009, Chlamydomonas Sourcebook Chapter 11); not conserved in humans except for two small tumor necrosis factor receptor superfamily motifs; Transition Zone Protein (44 spectral counts [Diener et al. Rosenbaum 2015]) MST1  |  Mastigoneme-like protein; 240 kDa flagellar protein in Chlamydomonas; Genbank entry AF508983. Mastigonemes are protein projections from the flagellar membrane. Found in the flagellar proteome [PMID: 15998802]
Cre12.g542250.t1.1 28 4 5 14 5 0 7.52 -2.31 TUBB4B TUB1 TUB1, beta-1 tubulin (Youngblom et al. Silflow 1984); Transition Zone Protein (61 spectral counts [Diener et al. Rosenbaum 2015]) TUB1  |  GI:167458; major constituent of microtubules [PMID: 3460413, PMID: 6098820]; it binds one mole of GTP that is hydrolyzed and alters dynamic instability of the microtubule cytoskeleton
Cre12.g549550.t1.2 28 4 5 14 5 0 11.75 -2.35 TUBB4B TUB2 TUB2, beta-2 tubulin (Youngblom et al. Silflow 1984); Cell Cycle Gene (Breker Lieberman and Cross 2018); Transition Zone Protein (61 spectral counts [Diener et al. Rosenbaum 2015]) TUB2  |  GI:167458; major constituent of microtubules [PMID: 3460413, PMID: 6098820]; it binds one mole of GTP that is hydrolyzed and alters dynamic instability of the microtubule cytoskeleton; ts-lethal mutant block at S/M (PMID 29743196)
Cre03.g199000.t1.2 27 6 9 11 1 0 PRKACB PHOT1; PHT1 PHOT1, Blue Light Receptor 1; PAS and Kinase Domain Containing Flagellar Associated Protein (Huang et al. Beck 2004); Transition Zone Protein (2 spectral counts [Diener et al. Rosenbaum 2015]) PHOT1  |  Blue-light receptor; found in flagella; regulates many biological processes including gametogenesis, chemotaxis, zygote maturation, light-stress response; contains two PAS and two protein kinase domains
Cre06.g263450.t2.1 26 0 16 8 2 0 -1.71 multiple EEF1A3 Elongation Factor 1 alpha Ciliary level increases during disassembly (Wang et al. Pan 2017); Transition Zone Protein (19 spectral counts [Diener et al. Rosenbaum 2015]) EEF1A3  |  EEF1a; high similarity to EF1A2; found in the flagellar proteome [PMID: 1599882]
Cre16.g663200.t1.1 26 4 7 14 1 0 PRKG2 FAP295 FAP295, Flagellar Associated Protein 295; Similar to cyclic nucleotide dependent protein kinase cGMP-dependent protein kinase? HA-tagged (Lechtreck et al. Witman 2009); Transition Zone Protein (3 spectral counts [Diener et al. Rosenbaum 2015]) FAP295  |  Flagellar Associated Protein, found in the flagellar proteome; Similar to cyclic nucleotide dependent protein kinase
Cre02.g113400.t1.2 20 9 0 2 9 0 10.51 -1.71 PACRG PACRG Parkin Co-Regulated Gene Protein (Ikeda et al. Kamiya 2007); Transition Zone Protein (2 spectral counts [Diener et al. Rosenbaum 2015])  |  NULL
Cre03.g180750.t1.2 20 0 20 0 0 0 7.65 none METE; MES1 METE, Methionine Synthase Upregulated During Gametic Activation (Kurvari et al. Snell 1995); Ciliary level increases during disassembly (Wang et al. Pan 2017); Transition Zone Protein (16 spectral counts [Diener et al. Rosenbaum 2015]) METE  |  5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase (EC 2.1.1.14); Vitamin B12-independent methionine synthase; homocysteine methylase; methyltetrahydropteroylpolyglutamate:homocysteine methyltransferase; (HMT); found in the flagellar p
Cre09.g390615.t1.1 20 0 7 4 9 0; Myr 15.78 -3.30 DAGLB FAP12 FAP12, Lipase Domain Flagellar Associated Protein 12; triacylglycerol lipase Transition Zone Protein (5 spectral counts [Diener et al. Rosenbaum 2015]) FAP12  |  triacylglycerol lipase
Cre13.g603700.t1.2 19 2 2 10 5 0 1.90 ACTG1 DII4; IDA5; ACT1; Actin DII4 (IDA5 | ACT1), Actin; present in Inner Arm Dynein species a b c d e g and some minor species (Hom et al. King 2011); Transition Zone Protein (5 spectral counts [Diener et al. Rosenbaum 2015]) DII4  |  Actin encoded by the IDA5 locus [gi:34581636, PMID: 9151671]; flagellar inner arm dynein subunit; present in Inner Arm Dynein species a b c d e g and some minor species
Cre12.g516200.t1.2 16 0 15 0 1 0 -1.26 EEF2 EFG2 EFG2, Similar to Elongation Factor 2 Ciliary level increases during disassembly (Wang et al. Pan 2017); Transition Zone Protein (6 spectral counts [Diener et al. Rosenbaum 2015]) EFG2  |  Putative cytosolic elongation factor 2 (EF-2), EF-TU; found in the flagellar proteome
Cre02.g081050.t1.2 15 3 8 2 2 0 1.76 -1.16 none FAP24 FAP24, Flagellar Associated Protein 24 Transition Zone Protein (28 spectral counts [Diener et al. Rosenbaum 2015]) FAP24  |  Conserved uncharacterized Flagellar Associated Protein; found in the flagellar proteome
Cre08.g372100.t1.2 15 10 2 2 1 0 -1.45 multiple HSP70A HSP70, Heat Shock 70 kDa Protein Transition Zone Protein (16 spectral counts [Diener et al. Rosenbaum 2015]) HSP70A  |  HSP70A is one of 9 genes encoding HSP70-like proteins in Chlamydomonas; HSP70A is localized to the cytosol and to flagella; it is inducible by heat shock and light [PMID: 2779571, 1541398, 16151252, 16143837]. Found in the flagellar proteome [PMID: 159988
Cre12.g549750.t1.2 13 1 0 9 3 0 multiple FAP4; CK1; CSK1 FAP4, Flagellar Associated Protein 4; Similar to Casein kinase-related Ser/Thr kinase Transition Zone Protein (7 spectral counts [Diener et al. Rosenbaum 2015]) FAP4  |  Ser-/Thr-kinase domain; homology to casein kinase 1 of higher plants and animals where it is involved in phosphorylation of components of the circadian clock; found in the flagellar proteome [PMID: 15998802]
Cre12.g559250.t1.2 13 0 11 2 0 0 multiple FTT1 14-3-3 Ciliary level increases during disassembly (Wang et al. Pan 2017); Centriolar Protein (Hamel et al. Gonczy 2017); Transition Zone Protein (12 spectral counts [Diener et al. Rosenbaum 2015]) FTT1  |  Fourteen-three-three (FTT) 14-3-3-like protein GF14 nu (General regulatory factor 7) [Arabidopsis thaliana]: Found in the flagellar proteome [PMID: 15998802]; PLA1 (3.1.1.4 Phospholipase A2)
Cre10.g456050.t1.2 12 0 12 0 0 0 none AGG3 Paralog; Flagellar Flavodoxine (Iomini et al. Piperno 2006); Transition Zone Protein (2 spectral counts [Diener et al. Rosenbaum 2015])  |  Flagellar Flavodoxine
Cre10.g456050.t2.1 12 0 12 0 0 0 none AGG3 Paralog; Flagellar Flavodoxine (Iomini et al. Piperno 2006); Transition Zone Protein (2 spectral counts [Diener et al. Rosenbaum 2015])  |  Flagellar Flavodoxine
Cre17.g715300.t1.2 12 0 1 8 3 6 -1.04 PKD2 PKD2 PKD2, Polycystin-2 (Huang et al. Rosenbaum 2007); Transition Zone Protein (5 spectral counts [Diener et al. Rosenbaum 2015]) PKD2  |  Flagellar protein similar to polycystin-2; found in the flagellar proteome
Cre10.g434600.t1.2 11 0 0 8 3 5 2.67 -2.15 APAF1 FAP148 FAP148, Cation Channel Domain Flagellar Associated Protein 148 Transition Zone Protein (2 spectral counts [Diener et al. Rosenbaum 2015]) FAP148  |  Flagellar Associated Protein with cation channel domain, found in the flagellar proteome
Cre01.g002300.t1.2 9 0 9 0 0 0 -1.26 PPIA CYN19-2; ROC1; CYN4 Peptidylprolyl Isomerase Cyclophilin 1; Similar to Radial Spoke Protein RSP12 Transition Zone Protein (3 spectral counts [Diener et al. Rosenbaum 2015]) CYN19-2  |  Peptidyl-prolyl cis-trans isomerase (rotamase), cyclophilin type; identical to AF5226 CYP1; cytosolic; similar to At4g38740 (ROC1, AtCYP18-3) and At2g21130+ (AtCYP19-2); found in the flagellar proteome; Similar to Radial Spoke Protein RSP12
Cre03.g178150.t1.1 8 2 2 2 2 0 2.83 CALM2 CAM1; RSP20 CAM1, Calmodulin 1; Radial Spoke Component Radial Spoke Subunit (Wargo et al. Smith 2005)(Yang et al. Witman 2006); Transition Zone Protein (4 spectral counts [Diener et al. Rosenbaum 2015]) CAM1  |  identical to CALM_CHLRE; contains 4 EF-hand, calcium binding motifs; Calmodulin mediates the control of a large number of enzymes by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatas
Cre06.g257500.t1.2 8 0 5 0 3 0 YWHAE FTT2 14-3-3 Ciliary level increases during disassembly (Wang et al. Pan 2017); Centriolar Protein (Hamel et al. Gonczy 2017); Transition Zone Protein (9 spectral counts [Diener et al. Rosenbaum 2015]) FTT2  |  Fourteen-three-three (FTT) protein, homolog of Vigna angularis accession BAB47119. Found in the flagellar proteome [PMID: 15998802], same as centriole protein POC8 [PMID: 15964273]. In addition to its presence in the flagellar and centriole proteomes, thi
Cre03.g181150.t1.1 7 4 2 1 0 0 7.66 DYNLL1 ; DYNLL12 DLL1; ODA-LC8; RSP22; FLA14 DLL1 (ODA-LC8 | RSP22), Light Chain Associated with Outer Arm Dynein, Cytoplasmic Dynein 1b, Inner Arm Dynein I1/f and Radial Spokes (Pazour et al. Witman 1998)(King et al. Patel-King 1995 ) (Hom et al. King 2011)(Yang et al. Witman 2006)(Schmidts et al. Witman 2015); The mutation in PF5 strain CC1331 is allelic to DLL1 but the mutation in PF5 strain CC1028 is not allelic. The defective gene in CC1028, presumptive to be the bona fide PF5, remains to be identified (Pinfen Yang). Centriolar Protein (Hamel et al. Gonczy 2017); Transition Zone Protein (4 spectral counts [Diener et al. Rosenbaum 2015]) FLA14  |  LC8 component of outer arm dynein, inner arm I1/f and RSP22 of radial spokes [PMID: 7744782; PMID: 9585416]; Matsuo et al. 28 [PMID: 18334618] reported that the roc16 (rhythm of chloroplast) circadian rhythm mutant locus maps here; the mutation in CC-13
Cre06.g269950.t1.2 7 0 7 0 0 0 2.27 VCP CDC48; GEX69 CDC48, Conserved AAA Domain Protein CDC48; involved in ubiquitin-dependent degradation of ER-bound substrates Cell Cycle Gene (Breker Lieberman and Cross 2018); Ciliary level increases during disassembly (Wang et al. Pan 2017); Transition Zone Protein (17 spectral counts [Diener et al. Rosenbaum 2015]) CDC48  |  Protein involved in ubiquitin-dependent degradation of ER-bound substrates; Conserved AAA domain; Flagellar Associated Protein; higher plant homologue is involved in formation of ER in the cell division plane during cytokinesis (PMID: 12427991); CDC48 (p9
Cre11.g468450.t1.2 7 2 0 4 1 0 3.27 -1.09 CETN1, CETN2, CETN3 DLE2; VFL2; Caltractin; Centrin DLE2 (VFL2 |Caltractin | Centrin), 20 kD Calcium-Binding Protein Centrin, subunit of Inner Arm Dyneins b, e, and g (Hom et al. King 2011); Transition Zone Protein (7 spectral counts [Diener et al. Rosenbaum 2015]) DLE2  |  Centrin present in monomeric inner arm dyneins b, e, and g; component of flagellar inner arm dyneins and basal body/centriole-associated structures; contains two Ca-binding EF-hand domain pairs; the vfl2 mutation in this gene produces cells with variable
Cre03.g204250.t1.2 6 0 6 0 0 0 4.59 -2.15 ahcY SAH1 SAH1; S-Adenosyl homocysteine hydrolase 1 Cell Cycle Gene (Breker Lieberman and Cross 2018); Ciliary level increases during disassembly (Wang et al. Pan 2017); Transition Zone Protein (6 spectral counts [Diener et al. Rosenbaum 2015]) SAH1  |  found in the flagellar proteome [PMID: 15998802]; ts-lethal mutant was isolated (PMID 29743196)
Cre04.g218250.t1.2 6 0 6 0 0 0 ARL3 FAP313; ARL3 FAP313, Flagellar Associated Protein 313; Similar to ADP-Ribosylation Factor-Like Transition Zone Protein (11 spectral counts [Diener et al. Rosenbaum 2015]) FAP313  |  Expressed Protein; similar to the ARL3 type of ARF-related small GTPase. This type of GTPase is found in animals but not in angiosperms. Found in the flagellar proteome [PMID: 15998802]
Cre06.g282800.t1.2 6 0 6 0 0 0 -2.72 aceA ICL1 Isocitrate Lyase Transition Zone Protein (8 spectral counts [Diener et al. Rosenbaum 2015]) ICL1  |  isocitrate lyase (EC 4.1.3.1); isocitrase; 98% identical to cDNA (AAB61446) [PMID: 9049260]
Cre09.g396400.t1.2 5 0 5 0 0 0 -1.18 UBB UBQ2 Similar to Polyubiquitin Transition Zone Protein (13 spectral counts [Diener et al. Rosenbaum 2015]) UBQ2  |  post-translationally modifies protein to tag them for proteasome-mediated degradation, internalization etc..; contains two ubiquitin domains in tandem
Cre02.g114600.t1.2 4 0 2 2 0 0 PRDX4 PRX2 PRX2, Peroxiredoxin 2; redox-sensitive (Wakabayashi and King 2006); Transition Zone Protein (3 spectral counts [Diener et al. Rosenbaum 2015]) PRX2  |  thioredoxin dependent peroxidase, probably cytosolic, more closely related to mammalian peroxiredoxins than to plant peroxiredoxins. Found in the flagellar proteome [PMID: 15998802].
Cre09.g395250.t1.1 4 0 4 0 0 0 CFAP36 FAP36; MOT5; CFAP36 FAP36, Flagellar Associated Protein 36 Transition Zone Protein (4 spectral counts [Diener et al. Rosenbaum 2015]) FAP36  |  Alanine rich protein, found in flagellar proteome; MOT5; identified by comparative genomics as being present only in organisms having motile (MOT) cilia
Cre12.g511850.t1.2 4 0 3 0 1 0 GSK3B GSK3 Glycogen Synthase Kinase 3 Transition Zone Protein (2 spectral counts [Diener et al. Rosenbaum 2015]) GSK3  |  Glycogen Synthase Kinase 3 [PMID: 15470259]; Shaggy Kinase; Zeste White Kinase-3; Housekeeping kinase involved in cytoskeletal regulation; gene regulation; kinesin regulation in mammals
Cre01.g010400.t1.2 3 0 1 0 2 2 1.82 FAP380 FAP380, Flagellar Associated Membrane Protein 380 Ciliary level increases during disassembly (Wang et al. Pan 2017); Transition Zone Protein (3 spectral counts [Diener et al. Rosenbaum 2015]) FAP380  |  NULL
Cre01.g050850.t1.2 3 0 3 0 0 0 1.73 PKL1 Similar to Protein Phosphatase Transition Zone Protein (18 spectral counts [Diener et al. Rosenbaum 2015]) PKL1  |  Serine/threonine protein phosphatase 1 Beta (PP1b); has a Kelch repeat at the N-terminus; found in the flagellar proteome [PMID: 15998802]. Similar to Arabidopsis BSL phosphatases. ts-lethal mutations block in G2 (PMID 25336509)
Cre01.g050850.t2.1 3 0 3 0 0 0 1.73 PKL1 Similar to Protein Phosphatase Transition Zone Protein (18 spectral counts [Diener et al. Rosenbaum 2015]) PKL1  |  Serine/threonine protein phosphatase 1 Beta (PP1b); has a Kelch repeat at the N-terminus; found in the flagellar proteome [PMID: 15998802]. Similar to Arabidopsis BSL phosphatases. ts-lethal mutations block in G2 (PMID 25336509)
Cre08.g364300.t1.2 3 0 3 0 0 1 6.07 ITIH5 FAP29 FAP29, von Willebrand Factor Type A Domain Flagellar Associated Protein 29 Transition Zone Protein (2 spectral counts [Diener et al. Rosenbaum 2015]) FAP29  |  Flagellar Associated Protein, found in flagellar proteome. Contains type A von Willebrand factor domain
Cre09.g392350.t1.2 3 0 3 0 0 0 CGLD37 Similar to Glycine-Rich RNA-Binding Protein Transition Zone Protein (3 spectral counts [Diener et al. Rosenbaum 2015]) CGLD37  |  conserved in the green lineage and Diatoms
Cre09.g392350.t2.1 3 0 3 0 0 0 CGLD37 Similar to Glycine-Rich RNA-Binding Protein Transition Zone Protein (3 spectral counts [Diener et al. Rosenbaum 2015]) CGLD37  |  conserved in the green lineage and Diatoms
Cre01.g049950.t1.1 2 2 0 0 0 1 0.92 VLE1 Similar to Subtilisin-Like Serine Proteases Transition Zone Protein (17 spectral counts [Diener et al. Rosenbaum 2015]) VLE1  |  subtilisin-like protease involved in the digestion of the sporangial/mother cell wall and hatching of daughter cells after mitosis in the Chlamydomonas vegetative cell cycle. Characterized by Kubo et al. (2009) [PMID: 19179351]; null-allele mutant was is
Cre07.g325724.t1.1 2 0 2 0 0 0; Myr 3.41 -1.69 PTP1 Protein tyrosine phosphatase 1 Ciliary level increases during disassembly (Wang et al. Pan 2017); Transition Zone Protein (4 spectral counts [Diener et al. Rosenbaum 2015]) PTP1  |  NULL
Cre07.g325724.t2.1 2 0 2 0 0 0; Myr 3.41 -1.69 PTP1 Similar to Protein Tyrosine Phosphatase 1 Ciliary level increases during disassembly (Wang et al. Pan 2017); Transition Zone Protein (4 spectral counts [Diener et al. Rosenbaum 2015]) PTP1  |  NULL
Cre09.g416350.t1.2 1 0 1 0 0 0 Transition Zone Protein (2 spectral counts [Diener et al. Rosenbaum 2015])  |  ChromoDB NFA341
Cre10.g465900.t1.2 1 0 0 1 0 0 CDKA1 Transition Zone Protein (6 spectral counts [Diener et al. Rosenbaum 2015]) CDKA1  |  P34 cdc2/CDK1 ortholog; orthologous to plant CDKA; PSTAIRE motif; null mutant delays G1/S; null-allele mutant was isolated (PMID 29743196)
Cre12.g492850.t1.1 1 1 0 0 0 0 POC19 Centriolar Protein (Hamel et al. Gonczy 2017); Transition Zone Protein (5 spectral counts [Diener et al. Rosenbaum 2015])  |  NULL
Cre13.g575701.t1.1 1 0 1 0 0 1 Transition Zone Protein (2 spectral counts [Diener et al. Rosenbaum 2015])  |  NULL
Cre14.g625550.t1.2 1 0 1 0 0 0 CFAP410 FAP410; CFAP410; C21orf2 FAP410, Flagellar Associated Protein 410; similar to human C21orf2/CFAP410 C21orf2 is mutated in recessive early-onset retinal dystrophy with macular staphyloma and encodes a protein that localizes to the photoreceptor primary cilium (Khan et al. Bolz 2015); Ciliary level increases during disassembly (Wang et al. Pan 2017); Transition Zone Protein (2 spectral counts [Diener et al. Rosenbaum 2015])  |  NULL
Cre14.g625550.t2.1 1 0 1 0 0 0 CFAP410 FAP410; CFAP410; C21orf2 FAP410, Flagellar Associated Protein 410; similar to human C21orf2/CFAP410 C21orf2 is mutated in recessive early-onset retinal dystrophy with macular staphyloma and encodes a protein that localizes to the photoreceptor primary cilium (Khan et al. Bolz 2015); Ciliary level increases during disassembly (Wang et al. Pan 2017); Transition Zone Protein (2 spectral counts [Diener et al. Rosenbaum 2015])  |  NULL
Cre01.g004350.t1.2 0 0 0 0 0 0 2.37 multiple HLM1; ROC77 Member of the BRO1_Alix_like superfamily Ciliary level increases during disassembly (Wang et al. Pan 2017); Transition Zone Protein (24 spectral counts [Diener et al. Rosenbaum 2015]) HLM1  |  Involved in circadian rhythms. Matsuo et al.'s (2008) roc77 and roc15 (rhythm of chloroplast) circadian rhythm mutant loci map here; they refer to this gene model as ALIX, although this designation is not generally accepted
Cre01.g009200.t1.2 0 0 0 0 0 1.56 POB29 Centriolar Protein (Hamel et al. Gonczy 2017); Transition Zone Protein (3 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre01.g022550.t1.1 0 0 0 0 0 Transition Zone Protein (4 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre01.g048400.t1.1 0 0 0 0 0 0 DZIP1L DZIP1L , DAZ interacting zinc finger protein 1 like Insetional mutant had paralyzed flagella (Lin Cliften Dutcher 2018); Transition Zone Protein (13 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre01.g053550.t1.1 0 0 0 0 0 Transition Zone Protein (5 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre02.g075350.t1.2 0 0 0 0 0 CNK1 CNK1, NimA-related protein kinase 1 Transition Zone Protein (9 spectral counts [Diener et al. Rosenbaum 2015]) CNK1  |  NimA related kinase homolog 1 [gi:34334391, PMID: 15068267]
Cre02.g075350.t2.1 0 0 0 0 0 CNK1 CNK1, NimA-related protein kinase 1 Transition Zone Protein (9 spectral counts [Diener et al. Rosenbaum 2015]) CNK1  |  NimA related kinase homolog 1 [gi:34334391, PMID: 15068267]
Cre02.g075350.t3.1 0 0 0 0 0 CNK1 CNK1, NimA-related protein kinase 1 Transition Zone Protein (9 spectral counts [Diener et al. Rosenbaum 2015]) CNK1  |  NimA related kinase homolog 1 [gi:34334391, PMID: 15068267]
Cre02.g079000.t1.2 0 0 0 0 0 POB21 Centriolar Protein (Hamel et al. Gonczy 2017); Transition Zone Protein (4 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre02.g079005.t1.1 0 0 0 0 0 Transition Zone Protein (4 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre02.g079300.t1.2 0 0 0 0 0 3.59 VPS4 VPS4, AAA-ATPase of VPS4/SKD1 family Transition Zone Protein (13 spectral counts [Diener et al. Rosenbaum 2015]) VPS4  |  Expressed Protein. Similar to VPS4/SKD1 AAA-ATPase, involved in vacuolar protein transport
Cre02.g091500.t1.1 0 0 0 0 0 Transition Zone Protein (9 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre02.g110350.t1.2 0 0 0 0 0 Transition Zone Protein (2 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre02.g141400.t1.2 0 0 0 0 0 PCK1b|PCK1a Phosphoenolpyruvate carboxykinase Transition Zone Protein (4 spectral counts [Diener et al. Rosenbaum 2015]) PCK1  |  phosphoenolpyruvate carboxykinase; PEP carboxykinase (EC 4.1.1.49); based on high similarity to PEPCK from Panicum maximum (GenBank AAQ10076) and many other plants; Target-P predicts no organelle targeting, so probably cytosolic form; may represent a mino
Cre03.g160450.t1.2 0 0 0 0 0 PF15 Katanin p80 subunit Transition Zone Protein (11 spectral counts [Diener et al. Rosenbaum 2015]) KAT2  |  Microtubule-severing protein katanin, p80 subunit; non-motile pf15 mutant in this gene lacks central pair microtubules
Cre03.g167550.t1.1 0 0 0 0 0 0 CEP290 CEP290 CEP290, Centrosomal Protein 290; Transition Zone Protein (Craige et al. Witman 2010); Centriolar Protein (Hamel et al. Gonczy 2017); Transition Zone Protein (68 spectral counts [Diener et al. Rosenbaum 2015]) CEP290  |  Found in basal body proteome [PMID: 15964273]; Transition Zone Protein; Human homolog cep29 localizes to centrosome, and is also called 3H11 antigen.
Cre03.g170550.t1.1 0 0 0 0 0 POC4 Centriolar Protein (Hamel et al. Gonczy 2017); Transition Zone Protein (34 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre03.g170550.t1.3 0 0 0 0 0 POC4 Centriolar Protein (Hamel et al. Gonczy 2017); Transition Zone Protein (34 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre03.g170600.t1.1 0 0 0 0 0 POC4 Centriolar Protein (Hamel et al. Gonczy 2017); Transition Zone Protein (34 spectral counts [Diener et al. Rosenbaum 2015]) POC4  |  Found in basal body proteome [PMID: 15964273]. Contains multiple SFI repeats, a conserved centrin-binding motif found in the yeast spindle pole body protein SFI1
Cre03.g173750.t1.1 0 0 0 0 0 -1.95 Transition Zone Protein (2 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre03.g178100.t1.1 0 0 0 0 0 MOT51 Lipoxygenase homology domain Transition Zone Protein (44 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre03.g181450.t1.1 0 0 0 0 0 2.81 POB7 Centriolar Protein (Hamel et al. Gonczy 2017); Transition Zone Protein (11 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre03.g187400.t1.2 0 0 0 0 0 Transition Zone Protein (3 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  null-allele mutant was isolated (PMID 29743196)
Cre03.g190900.t1.1 0 0 0 0 0 Transition Zone Protein (7 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre03.g196050.t1.2 0 0 0 0 0 B9D2-Like, B9-C2 Domain-Containing Transition Zone Protein Transition Zone Protein (4 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre03.g207900.t1.1 0 0 0 0 0 CYCA1; CYC1 A-type cyclin Transition Zone Protein (3 spectral counts [Diener et al. Rosenbaum 2015]) CYCA1  |  Cyclin A homolog; A-type cyclin homolog. Probable major activator of CDKA1; null mutation shows delayed entry into cell division (PMID 29367304).
Cre05.g240900.t1.2 0 0 0 0 0 2 6.15 Transition Zone Protein (4 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre05.g240900.t2.1 0 0 0 0 0 2 6.15 Transition Zone Protein (4 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre06.g249850.t1.1 0 0 0 0 0 1 Transition Zone Protein (2 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre06.g252600.t1.1 0 0 0 0 0 6 Transition Zone Protein (5 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre06.g257600.t1.1 0 0 0 0 0 FA1 FA1, Flagellar Autotomy Protein 1 Required for Axonemal Microtubule Severing Finst et al. Quarmby 2000; Transition Zone Protein (3 spectral counts [Diener et al. Rosenbaum 2015]) FA1  |  Flagellar autotomy protein, required for pH-induced excision of flagella (gi:7671199); PMID: 18617
Cre06.g257600.t2.1 0 0 0 0 0 FA1 FA1, Flagellar Autotomy Protein 1 Required for Axonemal Microtubule Severing Finst et al. Quarmby 2000; Transition Zone Protein (3 spectral counts [Diener et al. Rosenbaum 2015]) FA1  |  Flagellar autotomy protein, required for pH-induced excision of flagella (gi:7671199); PMID: 18617
Cre06.g278212.t1.1 0 0 0 0 0 CGL46 Predicted protein Transition Zone Protein (4 spectral counts [Diener et al. Rosenbaum 2015]) CGL46  |  NULL
Cre06.g278300.t1.2 0 0 0 0 0 2 4.05 -1.02 Transition Zone Protein (2 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre06.g283000.t1.1 0 0 0 0 0 Transition Zone Protein (5 spectral counts [Diener et al. Rosenbaum 2015]) CGLD39  |  NULL
Cre06.g302200.t1.1 0 0 0 0 0 1 1.60 Transition Zone Protein (5 spectral counts [Diener et al. Rosenbaum 2015]) EFH3  |  NULL
Cre06.g303800.t1.2 0 0 0 0 0 Transition Zone Protein (9 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre07.g327300.t1.1 0 0 0 0 0 Transition Zone Protein (7 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre07.g327300.t2.1 0 0 0 0 0 Transition Zone Protein (7 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre07.g332901.t1.1 0 0 0 0 0 Transition Zone Protein (2 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre07.g351050.t1.2 0 0 0 0 0 VPS23 VPS23 , Subunit of the ESCRT-I complex Transition Zone Protein (3 spectral counts [Diener et al. Rosenbaum 2015]) VPS23  |  Expressed Protein. Similar to VPS23/Tsg101, Tsg101/UBCc-like-domain protein, component of the ESCRT-I complex involved in the ubiquitin-mediated internalization into the multi-vesicular body (late endosome)
Cre08.g362550.t1.2 0 0 0 0 0 VPS37 VPS37, Subunit of the ESCRT-I complex Transition Zone Protein (5 spectral counts [Diener et al. Rosenbaum 2015]) VPS37  |  Expressed Protein. Similar to the VPS37 class of Ub-binding enzymes that are components of the ESCRT-I complex involved in protein sorting at the MVB.
Cre08.g385250.t1.1 0 0 0 0 0 Transition Zone Protein (4 spectral counts [Diener et al. Rosenbaum 2015]); named Nphp1 in this paper but support for this designation is not strong NULL  |  NULL
Cre09.g389023.t1.1 0 0 0 0 0 Transition Zone Protein (2 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre09.g390750.t1.1 0 0 0 0 0 ELG24 Exostosin-like glycosyltransferase Transition Zone Protein (4 spectral counts [Diener et al. Rosenbaum 2015]) ELG24  |  putative terminal arabinosyl transferase on HRGP, GT47 family
Cre09.g392900.t1.1 0 0 0 0 0 Transition Zone Protein (7 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  null-allele mutant was isolated (PMID 29743196)
Cre09.g393150.t1.2 0 0 0 0 0 1 3.79 FOX1 Multicopper ferroxidase Transition Zone Protein (2 spectral counts [Diener et al. Rosenbaum 2015]) FOX1  |  (FLP1); iron-deficiency inducible; plasma membrane localized [PMID: 12481087]
Cre09.g395251.t1.1 0 0 0 0 0 1 Transition Zone Protein (12 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre10.g427600.t1.2 0 0 0 0 0 KAT1 Katanin catalytic subunit Transition Zone Protein (8 spectral counts [Diener et al. Rosenbaum 2015]) KAT1  |  Microtubule-severing protein katanin, p60 (catalytic) subunit. Genbank accession AF205377; PMID: 10401578
Cre10.g436000.t1.1 0 0 0 0 0 POC2 Lipoxygenase homology domain Transition Zone Protein (82 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre10.g447300.t1.2 0 0 0 0 0 DDI2 Similar to DNA-damage inducible protein 2; N-terminus is similar to ubiquitin Transition Zone Protein (2 spectral counts [Diener et al. Rosenbaum 2015]) DDI1  |  contains UBA domain
Cre10.g459550.t1.1 0 0 0 0 0 B9D2-Like, B9-C2 Domain-Containing Transition Zone Protein Transition Zone Protein (7 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre12.g495350.t1.1 0 0 0 0 0 MKS1 MKS1, Centriole Proteome Protein Transition Zone Protein (12 spectral counts [Diener et al. Rosenbaum 2015]) POC12  |  Protein found in basal body proteome [PMID: 15964273]. Human homolog encoded by gene MKS1 defective in Meckel syndrome.
Cre12.g507909.t1.2 0 0 0 0 0 none Not conserved outside of Chlamydomonas Transition Zone Protein (2 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre12.g531400.t1.1 0 0 0 0 0 0 NPHP4 NPHP4, Nephrocystin 4 (Awata et al. Witman 2014); Centriolar Protein (Hamel et al. Gonczy 2017); Transition Zone Protein (59 spectral counts [Diener et al. Rosenbaum 2015]) NPHP4  |  Found in basal body proteome as POC10 [PMID: 15964273]. Mammalian homolog is NPHP-4, also known as nephroretinin, gene mutated in Senior-Loken syndrome.
Cre12.g536000.t1.2 0 0 0 0 0 9 3.56 -1.32 ALA2 ALA2, ATPase, aminophospholipid transporter Ciliary protein (Lin et al. Dutcher 2018); Transition Zone Protein (14 spectral counts [Diener et al. Rosenbaum 2015]) ALA2  |  phospholipid-translocating P-type ATPase, flippase
Cre13.g576000.t1.1 0 0 0 0 0 none Not conserved outside of green algae except for a small domain shared with a group of bacterial alanine-glyoxylate aminotransferases Transition Zone Protein (4 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre13.g577950.t1.2 0 0 0 0 0 VPS60 VPS60, Subunit of the ESCRT-III complex Transition Zone Protein (4 spectral counts [Diener et al. Rosenbaum 2015]) VPS60  |  Expressed Protein. Similar to VPS60, a SNF7-domain protein, component of the ESCRT-III complex involved in the ubiquitin-mediated internalization into the multi-vesicular bodies (late endosomes); exons missing in sequence gap supported by cDNA
Cre13.g584901.t1.1 0 0 0 0 0 5 TMEM67 TMEM67; MKS3 TMEM67, Transition Zone Protein Transition Zone Protein (4 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  May contain additional coding sequence in intronic N-island PMID: 27175017
Cre14.g611250.t1.2 0 0 0 0 0 EFHC1 POC9 Similar to EF-hand domain-containing protein 1 isoform 1 Centriolar Protein (Hamel et al. Gonczy 2017); Transition Zone Protein (15 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre14.g616800.t1.2 0 0 0 0 0 none Not conserved outside of green algae Transition Zone Protein (4 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre14.g632050.t1.2 0 0 0 0 0 RPGRIP1 RPGRIP1; POB25; RPGRIP1L Similar to X-linked retinitis pigmentosa GTPase regulator-interacting protein 1 Centriolar Protein (Hamel et al. Gonczy 2017); Transition Zone Protein (20 spectral counts [Diener et al. Rosenbaum 2015]); (Lin et al. Dutcher 2018) NULL  |  NULL
Cre16.g660750.t1.1 0 0 0 0 0 1 CC2D2A CC2D2A; MKS6 CC2D2A, Coiled-Coil and C2 domain-Containing Protein Centriolar Protein (Hamel et al. Gonczy 2017); Transition Zone Protein (26 spectral counts [Diener et al. Rosenbaum 2015]) CC2D2A  |  human homolog is causative of Joubert and Meckel syndromes
Cre16.g678100.t1.2 0 0 0 0 0 VPS28 VPS28, Subunit of the ESCRT-I complex Transition Zone Protein (2 spectral counts [Diener et al. Rosenbaum 2015]) VPS28  |  Component of the ESCRT-I protein complex, involved in ubiquitin-mediated internalization of proteins into multi-vesicular bodies (late endosomes); expressed Protein. Similar to VPS28, a component of the ESCRT-I protein complex, involved in ubiquitin-media
Cre16.g680790.t1.1 0 0 0 0 0 none Not conserved outside of green algae Transition Zone Protein (5 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre16.g692902.t1.1 0 0 0 0 0 AHI1 AHI1 AHI1, Jouberin-like Protein Transition Zone Protein (4 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre16.g695650.t1.1 0 0 0 0 0 1 1.93 -2.72 none Not conserved outside of green algae Transition Zone Protein (5 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre17.g728600.t1.2 0 0 0 0 0 0 -1.30 none Contains a Ku70-Like domain thought to be involved in DNA binding and repair Transition Zone Protein (5 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
Cre17.g737200.t1.2 0 0 0 0 0 0 none Not conserved outside of green algae Transition Zone Protein (10 spectral counts [Diener et al. Rosenbaum 2015]) NULL  |  NULL
© Gregory J. Pazour