The Chlamydomonas Flagellar Proteome Project
ChlamyFPv5 (gene name | annotation): FAP59 | "FAP59 (CCDC39), Flagellar Associated Protein 59; possible DRC; part of 96-nm molecular ruler"
Aliases: FAP59; CCDC39; PF8; FLA12; CFAP59
Structure:
References: "CCDC39, possible DRC (Lin et al. Nicastro 2011); part of 96-nm molecular ruler (Oda et al. 2014) encoded by PF8 and FLA12 (Lin et al. Dutcher 2015)"
CrFP Total Peptides = 28 (21 Axonemal Peptides | 1 M+M Peptides | 1 KCl Peptides | 5 Tergitol Peptides)
Wang Peptides (Wang et al. Pan 2017) = 16 (enriched 1.33 fold by ciliary shortening)
Phytozome (gene name | defline): FAP59 | Flagellar Associated Protein
O. Vallon Gene Name | Defline: FAP59 | Flagellar Associated Protein 59
O. Vallon Description: Conserved uncharacterized Flagellar Associated Protein; found in the flagellar proteome [PMID: 15998802]; possible DRC component; part of 96-nm molecular ruler
O. Vallon Synonyms: g17002.t1#Cre17.g701250.t1.1
Steve King Dynein Anotation: |
Yuqing Hou's Human Homologs: CCDC39, NP_852091.1, coiled-coil domain-containing protein 39 [Homo sapiens] (Blast E value: 8.00E-116 | Reprocal Best Match? Yes)
Albee et al. Dutcher 2013 Human Homolog: CCDC39, coiled-coil domain-containing protein 39
Lipid Modifications (N-Myristoylation: MGXXXS/T, S-Geranylgeranylation: CAAX , S-Geranylgeranylation: CC/CXC, S-Farnesylation: CAAX predicted by GPS-Lipid):
Fold Upregulated Post Deflagellation (Albee et al. Dutcher 2013) at 3 min: 5.8; at 10 min: 12.54; at 30 min: 7.06; at 60 min: 1.45
Importance of XAP5 for expression (Li et al. Hu 2018) Wild Type: 424.75 FPKM | XAP Mutant: 135.31 FPKM | Fold Change: -1.65
CLIP Library: Cre17.g701250
Phytozome Transcript: Cre17.g701250.t1.2
PhosphoPeptides
Protein Reference Source Peptide pLOGO
ChlamyFP Peptides
Fraction Sequence
(click on peptide to see other models containing this peptide)
T32LGLANSPQGADVELAEVR
T32RAEDDLLAAR
T32FLENETLNTK
T32QKLGLANSPQGADVELAEVR
T32FLENETLNTKEADAR
C15TEELNNQVELVK
B11LSNLGQEQR
A15ELISEISGGQGQNK
A15IHALDEQVVR
A15ELTLALER
A14DAAIAAASEQFAMQK
A14RADEAAIAGDIQVSEAR
A14SLQALVDDMTR
A14EQARTEELNNQVELVK
A14ALVDHDVLALEVK
A14KLENEFGNLDSMEAK
A14KQQLALSMEER
A14AEDDLLAAR
A14AATELAQR
A14ASELEAMR
A14QWEEAVEAMR
A14QQLALSMEER
A14SQVLFDLR
A14ALVDHDVLALEVKR
A14AMLLELK
A14VGSKEAFEER
A14SLQALVDDMTRR
A13GTENEVLYVENAR