The Chlamydomonas Flagellar Proteome Project
ChlamyFPv5 (gene name | annotation): FAP40 | "FAP40, Flagellar Associated Protein 40"
Aliases: FAP40; ISG-C1; ISG1
Structure:
References:
CrFP Total Peptides = 10 (2 Axonemal Peptides | 1 M+M Peptides | 6 KCl Peptides | 1 Tergitol Peptides)
Wang Peptides (Wang et al. Pan 2017) = (enriched fold by ciliary shortening)
Phytozome (gene name | defline): | Hydroxyproline-rich cell wall protein
Annotation v5.6 Symbol | Defline: FAP40 | Hydroxyproline-rich Flagellar Associated Protein 40
Annotation v5.6 Description: Putative extracellular matrix protein (cell wall protein); similar to Volvox ISG [PMID: 1600938]) and Chlamydomonas VSP-3 [PMID: 8000007]; ISG Genbank entry X65165; VSP-3 Genbank entry AY795084. Also known as flagella associated protein FAP40 [PMID: 15998
Annotation v5.6 Synonyms: g15608.t1#ISG1
Steve King Dynein Anotation: |
Yuqing Hou's Human Homologs: CDHR2, EAW85067.1, protocadherin LKC, isoform CRA_b [Homo sapiens] ISG-CI [Cr] (Blast E value: 0.07 | Reprocal Best Match? Yes)
Albee et al. Dutcher 2013 Human Homolog: ,
Lipid Modifications (N-Myristoylation: MGXXXS/T, S-Geranylgeranylation: CAAX , S-Geranylgeranylation: CC/CXC, S-Farnesylation: CAAX predicted by GPS-Lipid):
Fold Upregulated Post Deflagellation (Albee et al. Dutcher 2013) at 3 min: ; at 10 min: ; at 30 min: ; at 60 min:
Importance of XAP5 for expression (Li et al. Hu 2018) Wild Type: FPKM | XAP Mutant: FPKM | Fold Change:
CLIP Library: Cre16.g693500
Phytozome Transcript: Cre16.g693500.t1.1
PhosphoPeptides
Protein Reference Source Peptide pLOGO
ChlamyFP Peptides
Fraction Sequence
(click on peptide to see other models containing this peptide)
T28SVSVATTWSFGK
C12YLVPSHPSYSSSQPDFTGLGAFVIPGNK
C12AGLIYETVR
C12GSYWATEGLAANAAKR
C12LNDLPSPIK
C12AVYTGWNPATKR
C11GSYWATEGLAANAAK
B09AVYTGWNPATK
A11VKPDQGVSTLVCPAAPNAK
A11GVVVWIGSGYTQPNLK
© Gregory J. Pazour