The Chlamydomonas Flagellar Proteome Project
ChlamyFPv5 (gene name | annotation): FAP353 | "FAP353, Rab-like GTP-Binding Flagellar Associated Protein 353; Similar to RAB1 in mammals"
Aliases: FAP353; Rab1
Structure:
References:
CrFP Total Peptides = 4 (0 Axonemal Peptides | 3 M+M Peptides | 0 KCl Peptides | 1 Tergitol Peptides)
Wang Peptides (Wang et al. Pan 2017) = (enriched fold by ciliary shortening)
Phytozome (gene name | defline): | Small Rab-related GTPase
Annotation v5.6 Symbol | Defline: FAP353 | Rab-like GTP-Binding Flagellar Associated Protein 353
Annotation v5.6 Description: Similar to RabD/Rab1-type GTPases. Identical to YPTC1 [gi 2500073 sp Q39571 YPT1_CHLRE]. Found in the flagellar proteome [PMID: 15998802]
Annotation v5.6 Synonyms: RABD1#RAB1#Cre12.g560150.t1.1#g13316.t1
Steve King Dynein Anotation: |
Yuqing Hou's Human Homologs: RAB1A, NP_004152, ras-related protein Rab-1A isoform 1 [Homo sapiens] (Blast E value: 0.00 | Reprocal Best Match? )
Albee et al. Dutcher 2013 Human Homolog: ,
Lipid Modifications (N-Myristoylation: MGXXXS/T, S-Geranylgeranylation: CAAX , S-Geranylgeranylation: CC/CXC, S-Farnesylation: CAAX predicted by GPS-Lipid): S-Geranylgeranylation: CC/CXC
Fold Upregulated Post Deflagellation (Albee et al. Dutcher 2013) at 3 min: ; at 10 min: ; at 30 min: ; at 60 min:
Importance of XAP5 for expression (Li et al. Hu 2018) Wild Type: FPKM | XAP Mutant: FPKM | Fold Change:
CLIP Library: Cre12.g560150
Phytozome Transcript: Cre12.g560150.t1.2
PhosphoPeptides
Protein Reference Source Peptide pLOGO
ChlamyFP Peptides
Fraction Sequence
(click on peptide to see other models containing this peptide)
T16NATNVEQAFMTMAAEIK
B34AFADEIGIPFLETSAK
B32LQIWDTAGQER
B32MASQPIPTK
© Gregory J. Pazour