The Chlamydomonas Flagellar Proteome Project
ChlamyFPv5 (gene name | annotation): NPHP4 | "NPHP4, Nephrocystin 4"
Aliases: NPHP4
Structure: Transition Zone; Centriole
References: (Awata et al. Witman 2014); Centriolar Protein (Hamel et al. Gonczy 2017); Transition Zone Protein (59 spectral counts [Diener et al. Rosenbaum 2015])
CrFP Total Peptides = 0 (0 Axonemal Peptides | 0 M+M Peptides | 0 KCl Peptides | 0 Tergitol Peptides)
Wang Peptides (Wang et al. Pan 2017) = (enriched fold by ciliary shortening)
Jordan Peptides (Jordan et al. Pigino 2018) = Wild Type M+M: | Dhc1b-3 M+M: | Ift139-2 M+M: (Total Unique Peptides)
Phytozome (gene name | defline): NPHP4 | Nephrocystin-4-like protein
Annotation v5.6 Symbol | Defline: NPHP4 | Nephrocystin 4
Annotation v5.6 Description: Found in basal body proteome as POC10 [PMID: 15964273]. Mammalian homolog is NPHP-4, also known as nephroretinin, gene mutated in Senior-Loken syndrome.
Annotation v5.6 Synonyms: NPH4#g13078.t1
Steve King Dynein Anotation: |
Yuqing Hou's Human Homologs: , , (Blast E value: | Reprocal Best Match? )
Albee et al. Dutcher 2013 Human Homolog: ,
Lipid Modifications (N-Myristoylation: MGXXXS/T, S-Geranylgeranylation: CAAX , S-Geranylgeranylation: CC/CXC, S-Farnesylation: CAAX predicted by GPS-Lipid):
Fold Upregulated Post Deflagellation (Albee et al. Dutcher 2013) at 3 min: ; at 10 min: ; at 30 min: ; at 60 min:
Importance of XAP5 for expression (Li et al. Hu 2018) Wild Type: FPKM | XAP Mutant: FPKM | Fold Change:
CLIP Library: Cre12.g531400
Phytozome Transcript: Cre12.g531400.t1.1
PhosphoPeptides
Protein Reference Source Peptide pLOGO
ChlamyFP Peptides
Fraction Sequence
(click on peptide to see other models containing this peptide)
© Gregory J. Pazour