The Chlamydomonas Flagellar Proteome Project
ChlamyFPv5 (gene name | annotation): VSP6 | "Similar to Hydroxyproline Rich Glycoprotein Vsp6"
Aliases: VSP6
Structure: Membrane
References: (no data)
CrFP Total Peptides = 3 (2 Axonemal Peptides | 0 M+M Peptides | 1 KCl Peptides | 0 Tergitol Peptides)
Wang Peptides (Wang et al. Pan 2017) = (no data) (enriched (no data) fold by ciliary shortening)
Jordan Peptides (Jordan et al. Pigino 2018) = Wild Type M+M: 0 | Dhc1b-3 M+M: 3 | Ift139-2 M+M: 0 (Total Unique Peptides)
Picariello Peptides (Picariello et al. Witman 2019) = Wild Type M+M: 0 | Ift140 ΔN-terminal WD repeat M+M: 0 (Total Unique Peptides)
Phytozome (gene name | defline): | Hydroxyproline-rich cell wall protein
Annotation v5.6 Symbol | Defline: VSP6 | Hydroxyproline-rich cell wall glycoprotein
Annotation v5.6 Description: Hydroxyproline rich glycoprotein Vsp6; (SP)n-repeats, extracellular matrix protein (cell wall protein); resembles VSP4 [PMID: 7689882, Genbank AF382191]
Annotation v5.6 Synonyms: Cre02.g128000.t1.1#Cre02.g128000.t1.2#VSP6#g9721.t1
Steve King Dynein Anotation: (no data) | (no data)
Yuqing Hou's Human Homologs: (no data), (no data), (no data) (Blast E value: (no data) | Reprocal Best Match? (no data))
Albee et al. Dutcher 2013 Human Homolog: (no data), (no data)
Lipid Modifications (N-Myristoylation: MGXXXS/T, S-Geranylgeranylation: CAAX , S-Geranylgeranylation: CC/CXC, S-Farnesylation: CAAX predicted by GPS-Lipid): (no data)
Fold Upregulated Post Deflagellation (Albee et al. Dutcher 2013) at 3 min: (no data); at 10 min: (no data); at 30 min: (no data); at 60 min: (no data)
Importance of XAP5 for expression (Li et al. Hu 2018) Wild Type: 515.81 FPKM | XAP Mutant: 166.81 FPKM | Fold Change: -1.63
CLIP Library: Cre09.g392319
Phytozome Transcript: Cre09.g392319.t1.1
Protein Reference Source Peptide pLOGO
ChlamyFP Peptides
Fraction Sequence
(click on peptide to see other models containing this peptide)
© Gregory J. Pazour