The Chlamydomonas Flagellar Proteome Project
ChlamyFPv5 (gene name | annotation): VSP6 | "Similar to Hydroxyproline Rich Glycoprotein Vsp6"
Aliases: VSP6
Structure: Membrane
References:
CrFP Total Peptides = 3 (2 Axonemal Peptides | 0 M+M Peptides | 1 KCl Peptides | 0 Tergitol Peptides)
Wang Peptides (Wang et al. Pan 2017) = (enriched fold by ciliary shortening)
Phytozome (gene name | defline): | Hydroxyproline-rich cell wall protein
O. Vallon Gene Name | Defline: VSP6 | Hydroxyproline-rich cell wall glycoprotein
O. Vallon Description: Hydroxyproline rich glycoprotein Vsp6; (SP)n-repeats, extracellular matrix protein (cell wall protein); resembles VSP4 [PMID: 7689882, Genbank AF382191]
O. Vallon Synonyms: Cre02.g128000.t1.1#Cre02.g128000.t1.2#VSP6#g9721.t1
Steve King Dynein Anotation: |
Yuqing Hou's Human Homologs: , , (Blast E value: | Reprocal Best Match? )
Albee et al. Dutcher 2013 Human Homolog: ,
Lipid Modifications (N-Myristoylation: MGXXXS/T, S-Geranylgeranylation: CAAX , S-Geranylgeranylation: CC/CXC, S-Farnesylation: CAAX predicted by GPS-Lipid):
Fold Upregulated Post Deflagellation (Albee et al. Dutcher 2013) at 3 min: ; at 10 min: ; at 30 min: ; at 60 min:
Importance of XAP5 for expression (Li et al. Hu 2018) Wild Type: 515.81 FPKM | XAP Mutant: 166.81 FPKM | Fold Change: -1.63
CLIP Library: Cre09.g392319
Phytozome Transcript: Cre09.g392319.t1.1
PhosphoPeptides
Protein Reference Source Peptide pLOGO
ChlamyFP Peptides
Fraction Sequence
(click on peptide to see other models containing this peptide)
C18VLTSNWDTANR
A18DSTTVYQGCANPNNDPK
A18QGLTCTMANWK