The Chlamydomonas Flagellar Proteome Project
ChlamyFPv5 (gene name | annotation): IFT88 | "IFT88, Intraflagellar Transport Protein 88"
Aliases: IFT88
Structure: Intraflagellar Transport
References: (Pazour et al. Cole 2000)(Pazour et al. Besharse 2002)(Follit et al. Pazour 2009)(Cole 2003); Ciliary level increases during disassembly (Wang et al. Pan 2017)
CrFP Total Peptides = 11 (0 Axonemal Peptides | 11 M+M Peptides | 0 KCl Peptides | 0 Tergitol Peptides)
Wang Peptides (Wang et al. Pan 2017) = 8 (enriched 1.8 fold by ciliary shortening)
Phytozome (gene name | defline): IFT88 | Intraflagellar transport protein 88
O. Vallon Gene Name | Defline: IFT88 | Intraflagellar Transport Protein 88
O. Vallon Description: Component of core of IFT-B particle
O. Vallon Synonyms: g7816.t1
Steve King Dynein Anotation: |
Yuqing Hou's Human Homologs: IFT88, , (Blast E value: | Reprocal Best Match? )
Albee et al. Dutcher 2013 Human Homolog: IFT88, intraflagellar transport 88 homolog
Lipid Modifications (N-Myristoylation: MGXXXS/T, S-Geranylgeranylation: CAAX , S-Geranylgeranylation: CC/CXC, S-Farnesylation: CAAX predicted by GPS-Lipid):
Fold Upregulated Post Deflagellation (Albee et al. Dutcher 2013) at 3 min: 3.37; at 10 min: 7.58; at 30 min: 9.44; at 60 min: 2.97
Importance of XAP5 for expression (Li et al. Hu 2018) Wild Type: FPKM | XAP Mutant: FPKM | Fold Change:
CLIP Library: Cre07.g335750
Phytozome Transcript: Cre07.g335750.t1.1
PhosphoPeptides
Protein Reference Source Peptide pLOGO
ChlamyFP Peptides
Fraction Sequence
(click on peptide to see other models containing this peptide)
B16SMGSTLGSSGGGAMLVAR
B16NDINSALENAMEAK
B16MALDQISATAK
B16LANEVELAK
B16LNELPYALAAFK
B15SAADAAKNDINSALENAMEAK
B15KGDTSPEEQAR
B15GAGFTSAPNK
B15AAQLISEKVDR
B15RAEAAEYMTK
B15TNNLPAALGK