The Chlamydomonas Flagellar Proteome Project
ChlamyFPv5 (gene name | annotation): IFT88 | "IFT88, Intraflagellar Transport Protein 88"
Aliases: IFT88
Structure: Intraflagellar Transport
References: (Pazour et al. Cole 2000)(Pazour et al. Besharse 2002)(Follit et al. Pazour 2009)(Cole 2003); Ciliary level increases during disassembly (Wang et al. Pan 2017)
CrFP Total Peptides = 11 (0 Axonemal Peptides | 11 M+M Peptides | 0 KCl Peptides | 0 Tergitol Peptides)
Wang Peptides (Wang et al. Pan 2017) = 8 (enriched 2 fold by ciliary shortening)
Jordan Peptides (Jordan et al. Pigino 2018) = Wild Type M+M: 25 | Dhc1b-3 M+M: 23 | Ift139-2 M+M: 26 (Total Unique Peptides)
Picariello Peptides (Picariello et al. Witman 2019) = Wild Type M+M: 27 | Ift140 ΔN-terminal WD repeat M+M: 26 (Total Unique Peptides)
Phytozome (gene name | defline): IFT88 | Intraflagellar transport protein 88
Annotation v5.6 Symbol | Defline: IFT88 | Intraflagellar Transport Protein 88
Annotation v5.6 Description: Component of core of IFT-B particle
Annotation v5.6 Synonyms: g7816.t1
Steve King Dynein Anotation: |
Yuqing Hou's Human Homologs: IFT88, , (Blast E value: | Reprocal Best Match? )
Albee et al. Dutcher 2013 Human Homolog: IFT88, intraflagellar transport 88 homolog
Lipid Modifications (N-Myristoylation: MGXXXS/T, S-Geranylgeranylation: CAAX , S-Geranylgeranylation: CC/CXC, S-Farnesylation: CAAX predicted by GPS-Lipid):
Fold Upregulated Post Deflagellation (Albee et al. Dutcher 2013) at 3 min: 3.37; at 10 min: 7.58; at 30 min: 9.44; at 60 min: 2.97
Importance of XAP5 for expression (Li et al. Hu 2018) Wild Type: FPKM | XAP Mutant: FPKM | Fold Change:
CLIP Library: Cre07.g335750
Phytozome Transcript: Cre07.g335750.t1.1
Protein Reference Source Peptide pLOGO
ChlamyFP Peptides
Fraction Sequence
(click on peptide to see other models containing this peptide)
© Gregory J. Pazour