The Chlamydomonas Flagellar Proteome Project
ChlamyFPv5 (gene name | annotation): SHMT2 | "Serine hydroxymethyltransferase"
Aliases: SHMT2
CrFP Total Peptides = 3 (0 Axonemal Peptides | 3 M+M Peptides | 0 KCl Peptides | 0 Tergitol Peptides)
Wang Peptides (Wang et al. Pan 2017) = (enriched fold by ciliary shortening)
Phytozome (gene name | defline): | Serine hydroxymethyltransferase 2
Annotation v5.6 Symbol | Defline: SHMT2 | Serine hydroxymethyltransferase
Annotation v5.6 Description: Serine hydroxymethyltransferase, by homology to Arabidopsis gene (Identifier 023254); found in the flagellar proteome [PMID: 15998802]
Annotation v5.6 Synonyms: g6806.t1#SHMT2#Cre06.g293950.t1.1
Steve King Dynein Anotation: |
Yuqing Hou's Human Homologs: , , (Blast E value: | Reprocal Best Match? )
Albee et al. Dutcher 2013 Human Homolog: SHMT2, serine hydroxymethyltransferase, partial
Lipid Modifications (N-Myristoylation: MGXXXS/T, S-Geranylgeranylation: CAAX , S-Geranylgeranylation: CC/CXC, S-Farnesylation: CAAX predicted by GPS-Lipid):
Fold Upregulated Post Deflagellation (Albee et al. Dutcher 2013) at 3 min: 1.97; at 10 min: 3.30; at 30 min: 16.63; at 60 min: 43.97
Importance of XAP5 for expression (Li et al. Hu 2018) Wild Type: 340.55 FPKM | XAP Mutant: 156.89 FPKM | Fold Change: -1.12
CLIP Library: Cre06.g293950
Phytozome Transcript: Cre06.g293950.t1.2
Protein Reference Source Peptide pLOGO
ChlamyFP Peptides
Fraction Sequence
(click on peptide to see other models containing this peptide)
© Gregory J. Pazour