The Chlamydomonas Flagellar Proteome Project
ChlamyFPv5 (gene name | annotation): SHMT2 | "Serine hydroxymethyltransferase"
Aliases: SHMT2
Structure: (no data)
References: (no data)
CrFP Total Peptides = 3 (0 Axonemal Peptides | 3 M+M Peptides | 0 KCl Peptides | 0 Tergitol Peptides)
Wang Peptides (Wang et al. Pan 2017) = (no data) (enriched (no data) fold by ciliary shortening)
Jordan Peptides (Jordan et al. Pigino 2018) = Wild Type M+M: 13 | Dhc1b-3 M+M: 11 | Ift139-2 M+M: 20 (Total Unique Peptides)
Picariello Peptides (Picariello et al. Witman 2019) = Wild Type M+M: 24 | Ift140 ΔN-terminal WD repeat M+M: 26 (Total Unique Peptides)
Phytozome (gene name | defline): | Serine hydroxymethyltransferase 2
Annotation v5.6 Symbol | Defline: SHMT2 | Serine hydroxymethyltransferase
Annotation v5.6 Description: Serine hydroxymethyltransferase, by homology to Arabidopsis gene (Identifier 023254); found in the flagellar proteome [PMID: 15998802]
Annotation v5.6 Synonyms: g6806.t1#SHMT2#Cre06.g293950.t1.1
Steve King Dynein Anotation: (no data) | (no data)
Yuqing Hou's Human Homologs: (no data), (no data), (no data) (Blast E value: (no data) | Reprocal Best Match? (no data))
Albee et al. Dutcher 2013 Human Homolog: SHMT2, serine hydroxymethyltransferase, partial
Lipid Modifications (N-Myristoylation: MGXXXS/T, S-Geranylgeranylation: CAAX , S-Geranylgeranylation: CC/CXC, S-Farnesylation: CAAX predicted by GPS-Lipid): (no data)
Fold Upregulated Post Deflagellation (Albee et al. Dutcher 2013) at 3 min: 1.97; at 10 min: 3.3; at 30 min: 16.63; at 60 min: 43.97
Importance of XAP5 for expression (Li et al. Hu 2018) Wild Type: 340.55 FPKM | XAP Mutant: 156.89 FPKM | Fold Change: -1.12
CLIP Library: Cre06.g293950
Phytozome Transcript: Cre06.g293950.t1.2
Protein Reference Source Peptide pLOGO
ChlamyFP Peptides
Fraction Sequence
(click on peptide to see other models containing this peptide)
© Gregory J. Pazour