The Chlamydomonas Flagellar Proteome Project
ChlamyFPv5 (gene name | annotation): CDC48 | "CDC48, Conserved AAA Domain Protein CDC48; involved in ubiquitin-dependent degradation of ER-bound substrates"
Aliases: CDC48; GEX69
Structure: Transition Zone
References: Cell Cycle Gene (Breker Lieberman and Cross 2018); Ciliary level increases during disassembly (Wang et al. Pan 2017); Transition Zone Protein (17 spectral counts [Diener et al. Rosenbaum 2015])
CrFP Total Peptides = 7 (0 Axonemal Peptides | 7 M+M Peptides | 0 KCl Peptides | 0 Tergitol Peptides)
Wang Peptides (Wang et al. Pan 2017) = 11 (enriched 2 fold by ciliary shortening)
Jordan Peptides (Jordan et al. Pigino 2018) = Wild Type M+M: 30 | Dhc1b-3 M+M: 22 | Ift139-2 M+M: 14 (Total Unique Peptides)
Picariello Peptides (Picariello et al. Witman 2019) = Wild Type M+M: 26 | Ift140 ΔN-terminal WD repeat M+M: 32 (Total Unique Peptides)
Phytozome (gene name | defline): | Protein involved in ubiquitin-dependent degradation of ER-bound substrates
Annotation v5.6 Symbol | Defline: CDC48 | Cell Division Cycle protein 48
Annotation v5.6 Description: Protein involved in ubiquitin-dependent degradation of ER-bound substrates; Conserved AAA domain; Flagellar Associated Protein; higher plant homologue is involved in formation of ER in the cell division plane during cytokinesis (PMID: 12427991); CDC48 (p9
Annotation v5.6 Synonyms: g6057.t1#EZY21#Cre06.g269950.t1.1#CDC48#NSG14
Steve King Dynein Anotation: (no data) | (no data)
Yuqing Hou's Human Homologs: VCP, (no data), (no data) (Blast E value: (no data) | Reprocal Best Match? (no data))
Albee et al. Dutcher 2013 Human Homolog: VCP, transitional endoplasmic reticulum ATPase
Lipid Modifications (N-Myristoylation: MGXXXS/T, S-Geranylgeranylation: CAAX , S-Geranylgeranylation: CC/CXC, S-Farnesylation: CAAX predicted by GPS-Lipid): (no data)
Fold Upregulated Post Deflagellation (Albee et al. Dutcher 2013) at 3 min: 1.1; at 10 min: 1.46; at 30 min: 2.27; at 60 min: 3.1
Importance of XAP5 for expression (Li et al. Hu 2018) Wild Type: (no data) FPKM | XAP Mutant: (no data) FPKM | Fold Change: (no data)
CLIP Library: Cre06.g269950
Phytozome Transcript: Cre06.g269950.t1.2
PhosphoPeptides
Protein Reference Source Peptide pLOGO
Cre06.g269950.t1.2--S518(Werth et al. Hicks 2018) AZD-insensitive Whole Cell ExtractFGMSPSKGVLFYGPPGCGK
ChlamyFP Peptides
Fraction Sequence
(click on peptide to see other models containing this peptide)
B13ADASTSADASKK
B13DFSTAIMDRK
B13ADASTSADASK
B13GSSAGDAGGAADR
B13LIVEEAVNDDNSVVALHPK
B12TALGMSNPSALR
B12NAPSIIFIDEVDSIAPK
© Gregory J. Pazour