The Chlamydomonas Flagellar Proteome Project
ChlamyFPv5 (gene name | annotation): (no data) | "Parkin Co-Regulated Gene Protein"
Aliases: PACRG
Structure: (no data)
References: (Ikeda et al. Kamiya 2007); Transition Zone Protein (2 spectral counts [Diener et al. Rosenbaum 2015]); Works with FAP20 to form the inner junction of axonmeal doublet microtubules (Dymek et al. Smith 2019);S
CrFP Total Peptides = 20 (9 Axonemal Peptides | 0 M+M Peptides | 2 KCl Peptides | 9 Tergitol Peptides)
Wang Peptides (Wang et al. Pan 2017) = 8 (enriched 1 fold by ciliary shortening)
Jordan Peptides (Jordan et al. Pigino 2018) = Wild Type M+M: 3 | Dhc1b-3 M+M: 3 | Ift139-2 M+M: 3 (Total Unique Peptides)
Picariello Peptides (Picariello et al. Witman 2019) = Wild Type M+M: 9 | Ift140 ΔN-terminal WD repeat M+M: 14 (Total Unique Peptides)
Zhao Central Apparatus Project (Zhao et al. Witman 2019) = Wild Type Axo: 124 | Pf18 Axo: 132 (Total Unique Peptides, summed from two biological replicates for each. Proteins found only in this dataset needed 10 or more peptides to be included)
Phytozome (gene name | defline): | 1
Annotation v5.6 Symbol | Defline: | Parkin Co-Regulated Gene Protein
Annotation v5.6 Description: NULL
Annotation v5.6 Synonyms: Cre02.g113400.t1.1#g2336.t1#BUG21
Steve King Dynein Anotation: (no data) | (no data)
Yuqing Hou's Human Homologs: PACRG, (no data), (no data) (Blast E value: (no data) | Reprocal Best Match? (no data))
Albee et al. Dutcher 2013 Human Homolog: PACRG, parkin coregulated gene protein isoform 2
Lipid Modifications (N-Myristoylation: MGXXXS/T, S-Geranylgeranylation: CAAX , S-Geranylgeranylation: CC/CXC, S-Farnesylation: CAAX predicted by GPS-Lipid): (no data)
Fold Upregulated Post Deflagellation (Albee et al. Dutcher 2013) at 3 min: 8.62; at 10 min: 13.1; at 30 min: 10.51; at 60 min: 3.1
Importance of XAP5 for expression (Li et al. Hu 2018) Wild Type: 4764.75 FPKM | XAP Mutant: 1459.61 FPKM | Fold Change: -1.71
CLIP Library: Cre02.g113400
Phytozome Transcript: Cre02.g113400.t1.2
PhosphoPeptides
Protein Reference Source Peptide pLOGO
Cre02.g113400.t1.2--S103 (Werth et al. Hicks 2018)Wild Type Whole Cell ExtractKPSPPQAGAYKKPpSPPQAGAYK
Cre02.g113400.t1.2--S42 (Werth et al. Hicks 2018)Wild Type Whole Cell ExtractAPPAANLSGTGSCFDTTSLSPARAPPAANLSGTGSCFDTTSLpSPAR
Cre02.g113400.t1.2--S42(Werth et al. Hicks 2018) AZD-insensitive Whole Cell ExtractAPPAANLSGTGSCFDTTSLSPAR
Cre02.g113400.t1.2--S103(Werth et al. Hicks 2018) AZD-insensitive Whole Cell ExtractKPSPPQAGAYK
Parkin Co-Regulated Gene Protein(Pazour unpublished)Purified FlagellaKPSPPQAGAYKKPpSPPQAGAYK
Parkin Co-Regulated Gene Protein(Pazour unpublished)Purified FlagellaKPSPPQAGAYKRKPpSPPQAGAYKR
ChlamyFP Peptides
Fraction Sequence
(click on peptide to see other models containing this peptide)
T13ALDVQKDELPVWSK
T13MNGDVAGSLFTSTYR
T13KGDGEMIK
T13KGDGEMIKTK
T13ILPVIPQLIIPIK
T13KPSPPQAGAYKR
T13ILPVIPQLIIPIKTALNTR
T13KPSPPQAGAYK
T12YPAGRPNPTGFLK
C32GGDDAFINIK
C32ENPPNTAFR
A34FYERGDLPIAVDHR
A34STLSYKYPAGRPNPTGFLK
A34GDLPIAVDHR
A33LAGKAPPAANLSGTGSCFDTTSLSPAR
A33NLGDGIDYGQR
A33APPAANLSGTGSCFDTTSLSPAR
A33NKNLGDGIDYGQR
A33QILPIFNLYK
A33RENPPNTAFR
© Gregory J. Pazour