The Chlamydomonas Flagellar Proteome Project
ChlamyFPv5 (gene name | annotation): | "VPS4, AAA-ATPase of VPS4/SKD1 family"
Aliases: VPS4
Structure: Transition Zone
References: Transition Zone Protein (13 spectral counts [Diener et al. Rosenbaum 2015])
CrFP Total Peptides = 0 (0 Axonemal Peptides | 0 M+M Peptides | 0 KCl Peptides | 0 Tergitol Peptides)
Wang Peptides (Wang et al. Pan 2017) = (enriched fold by ciliary shortening)
Jordan Peptides (Jordan et al. Pigino 2018) = Wild Type M+M: 0 | Dhc1b-3 M+M: 0 | Ift139-2 M+M: 0 (Total Unique Peptides)
Phytozome (gene name | defline): |
Annotation v5.6 Symbol | Defline: VPS4 | AAA-ATPase of VPS4/SKD1 family
Annotation v5.6 Description: Expressed Protein. Similar to VPS4/SKD1 AAA-ATPase, involved in vacuolar protein transport
Annotation v5.6 Synonyms: VPS4#g1448.t1#Cre02.g079300.t1.1
Steve King Dynein Anotation: |
Yuqing Hou's Human Homologs: , , (Blast E value: | Reprocal Best Match? )
Albee et al. Dutcher 2013 Human Homolog: VPS4B, vacuolar protein sorting-associated protein 4B
Lipid Modifications (N-Myristoylation: MGXXXS/T, S-Geranylgeranylation: CAAX , S-Geranylgeranylation: CC/CXC, S-Farnesylation: CAAX predicted by GPS-Lipid):
Fold Upregulated Post Deflagellation (Albee et al. Dutcher 2013) at 3 min: 1.99; at 10 min: 3.46; at 30 min: 3.59; at 60 min: 1.21
Importance of XAP5 for expression (Li et al. Hu 2018) Wild Type: FPKM | XAP Mutant: FPKM | Fold Change:
CLIP Library: Cre02.g079300
Phytozome Transcript: Cre02.g079300.t1.2
PhosphoPeptides
Protein Reference Source Peptide pLOGO
ChlamyFP Peptides
Fraction Sequence
(click on peptide to see other models containing this peptide)
© Gregory J. Pazour