The Chlamydomonas Flagellar Proteome Project
ChlamyFPv5 (gene name | annotation): RPL40 | "Similar to Polyubiquitin"
Aliases: RPL40
Structure:
References:
CrFP Total Peptides = 5 (0 Axonemal Peptides | 5 M+M Peptides | 0 KCl Peptides | 0 Tergitol Peptides)
Wang Peptides (Wang et al. Pan 2017) = (enriched fold by ciliary shortening)
Jordan Peptides (Jordan et al. Pigino 2018) = Wild Type M+M: | Dhc1b-3 M+M: | Ift139-2 M+M: (Total Unique Peptides)
Phytozome (gene name | defline): RPL40 | "(1 of 1) K02927 - large subunit ribosomal protein L40e (RP-L40e, RPL40)"
Annotation v5.6 Symbol | Defline: RPL40 | Cytosolic 80S ribosomal protein L40, ubiquitin fusion
Annotation v5.6 Description: cytosolic 60S large ribosomal subunit; ubiquitin-2 like RAD60 N-terminal domain
Annotation v5.6 Synonyms: Cre01.g007051.t1.1#g185.t1
Steve King Dynein Anotation: |
Yuqing Hou's Human Homologs: UBA52, NP_001307950, ubiquitin-60S ribosomal protein L40 isoform 2 [Homo sapiens] (Blast E value: 0 | Reprocal Best Match? )
Albee et al. Dutcher 2013 Human Homolog: ,
Lipid Modifications (N-Myristoylation: MGXXXS/T, S-Geranylgeranylation: CAAX , S-Geranylgeranylation: CC/CXC, S-Farnesylation: CAAX predicted by GPS-Lipid):
Fold Upregulated Post Deflagellation (Albee et al. Dutcher 2013) at 3 min: ; at 10 min: ; at 30 min: ; at 60 min:
Importance of XAP5 for expression (Li et al. Hu 2018) Wild Type: FPKM | XAP Mutant: FPKM | Fold Change:
CLIP Library: Cre01.g007051
Phytozome Transcript: Cre01.g007051.t1.2
PhosphoPeptides
Protein Reference Source Peptide pLOGO
ChlamyFP Peptides
Fraction Sequence
(click on peptide to see other models containing this peptide)
B40IQDKEGIPPDQQR
B40ESTLHLVLR
B40TITLEVESSDTIENVK
B40TLADYNIQK
B40MQIFVK
© Gregory J. Pazour