The Chlamydomonas Flagellar Proteome Project
ChlamyFPv5 (gene name | annotation): HLM1 | "Member of the BRO1_Alix_like superfamily"
Aliases: HLM1; ROC77
Structure: Transition Zone
References: Ciliary level increases during disassembly (Wang et al. Pan 2017); Transition Zone Protein (24 spectral counts [Diener et al. Rosenbaum 2015])
CrFP Total Peptides = 0 (0 Axonemal Peptides | 0 M+M Peptides | 0 KCl Peptides | 0 Tergitol Peptides)
Wang Peptides (Wang et al. Pan 2017) = 2 (enriched 2 fold by ciliary shortening)
Jordan Peptides (Jordan et al. Pigino 2018) = Wild Type M+M: 7 | Dhc1b-3 M+M: 10 | Ift139-2 M+M: 7 (Total Unique Peptides)
Phytozome (gene name | defline): |
Annotation v5.6 Symbol | Defline: HLM1 | Histone-lysine N-methyltransferase
Annotation v5.6 Description: Involved in circadian rhythms. Matsuo et al.'s (2008) roc77 and roc15 (rhythm of chloroplast) circadian rhythm mutant loci map here; they refer to this gene model as ALIX, although this designation is not generally accepted
Annotation v5.6 Synonyms: ALIX#g107.t1#HLM1#Cre01.g004350.t1.1#ROC77
Steve King Dynein Anotation: |
Yuqing Hou's Human Homologs: multiple, , (Blast E value: | Reprocal Best Match? )
Albee et al. Dutcher 2013 Human Homolog: PTPN23, protein tyrosine phosphatase, non-receptor type 23, isoform CRA_c
Lipid Modifications (N-Myristoylation: MGXXXS/T, S-Geranylgeranylation: CAAX , S-Geranylgeranylation: CC/CXC, S-Farnesylation: CAAX predicted by GPS-Lipid):
Fold Upregulated Post Deflagellation (Albee et al. Dutcher 2013) at 3 min: 2.16; at 10 min: 2.99; at 30 min: 2.37; at 60 min: 0.96
Importance of XAP5 for expression (Li et al. Hu 2018) Wild Type: FPKM | XAP Mutant: FPKM | Fold Change:
CLIP Library: Cre01.g004350
Phytozome Transcript: Cre01.g004350.t1.2
Protein Reference Source Peptide pLOGO
ChlamyFP Peptides
Fraction Sequence
(click on peptide to see other models containing this peptide)
© Gregory J. Pazour