The Chlamydomonas Flagellar Proteome Project
ChlamyFPv5 (gene name | annotation): CYN19-2 | "Peptidylprolyl Isomerase Cyclophilin 1; Similar to Radial Spoke Protein RSP12"
Aliases: CYN19-2; ROC1; CYN4
Structure: Transition Zone
References: Transition Zone Protein (3 spectral counts [Diener et al. Rosenbaum 2015])
CrFP Total Peptides = 9 (0 Axonemal Peptides | 9 M+M Peptides | 0 KCl Peptides | 0 Tergitol Peptides)
Wang Peptides (Wang et al. Pan 2017) = (enriched fold by ciliary shortening)
Jordan Peptides (Jordan et al. Pigino 2018) = Wild Type M+M: 7 | Dhc1b-3 M+M: 8 | Ift139-2 M+M: 8 (Total Unique Peptides)
Picariello Peptides (Picariello et al. Witman 2019) = Wild Type M+M: 8 | Ift140 ΔN-terminal WD repeat M+M: 6 (Total Unique Peptides)
Phytozome (gene name | defline): CYN19-2 | "Peptidyl-prolyl cis-trans isomerase, cyclophilin-type"
Annotation v5.6 Symbol | Defline: CYN19-2 | Cyclophilin
Annotation v5.6 Description: Peptidyl-prolyl cis-trans isomerase (rotamase), cyclophilin type; identical to AF5226 CYP1; cytosolic; similar to At4g38740 (ROC1, AtCYP18-3) and At2g21130+ (AtCYP19-2); found in the flagellar proteome; Similar to Radial Spoke Protein RSP12
Annotation v5.6 Synonyms: g56.t1#CYN4#Cre01.g002300.t1.1
Steve King Dynein Anotation: |
Yuqing Hou's Human Homologs: PPIA, AAH05982, Peptidylprolyl isomerase A (cyclophilin A) [Homo sapiens] (Blast E value: 0 | Reprocal Best Match? )
Albee et al. Dutcher 2013 Human Homolog: ,
Lipid Modifications (N-Myristoylation: MGXXXS/T, S-Geranylgeranylation: CAAX , S-Geranylgeranylation: CC/CXC, S-Farnesylation: CAAX predicted by GPS-Lipid):
Fold Upregulated Post Deflagellation (Albee et al. Dutcher 2013) at 3 min: ; at 10 min: ; at 30 min: ; at 60 min:
Importance of XAP5 for expression (Li et al. Hu 2018) Wild Type: 2557.99 FPKM | XAP Mutant: 1066.4 FPKM | Fold Change: -1.26
CLIP Library: Cre01.g002300
Phytozome Transcript: Cre01.g002300.t1.2
Protein Reference Source Peptide pLOGO
ChlamyFP Peptides
Fraction Sequence
(click on peptide to see other models containing this peptide)
© Gregory J. Pazour